| Perspectives on Codebook: sequence specificity of uncharacterized human transcription factors |
| Arttu Jolma, Kaitlin U. Laverty, Ali Fathi, Ally W.H. Yang, Isaac Yellan, Ilya E. Vorontsov, Sachi Inukai, Judith F. Kribelbauer-Swietek, Antoni J. Gralak, Rozita Razavi, Mihai Albu, Alexander Brechalov, Zain M. Patel, Vladimir Nozdrin, Georgy Meshcheryakov, Ivan Kozin, Sergey Abramov, Alexandr Boytsov, The Codebook Consortium, Oriol Fornes, Vsevolod J. Makeev, Jan Grau, Ivo Grosse, Philipp Bucher, Bart Deplancke, Ivan V. Kulakovskiy, Timothy R. Hughes bioRxiv 2024.11.11.622097; doi: https://doi.org/10.1101/2024.11.11.622097 |
| GHT-SELEX demonstrates unexpectedly high intrinsic sequence specificity and complex DNA binding of many human transcription factors |
| Arttu Jolma, Aldo Hernandez-Corchado, Ally W.H. Yang, Ali Fathi, Kaitlin U. Laverty, Alexander Brechalov, Rozita Razavi, Mihai Albu, Hong Zheng, The Codebook Consortium, Ivan V. Kulakovskiy, Hamed S. Najafabadi, Timothy R. Hughes bioRxiv 2024.11.11.618478; doi: https://doi.org/10.1101/2024.11.11.618478 |
| Extensive binding of uncharacterized human transcription factors to genomic dark matter |
| Rozita Razavi, Ali Fathi, Isaac Yellan, Alexander Brechalov, Kaitlin U. Laverty, Arttu Jolma, Aldo Hernandez-Corchado, Hong Zheng, Ally W.H. Yang, Mihai Albu, Marjan Barazandeh, Chun Hu, Ilya E. Vorontsov, Zain M. Patel, The Codebook Consortium, Ivan V. Kulakovskiy, Philipp Bucher, Quaid Morris, Hamed S. Najafabadi, Timothy R. Hughes bioRxiv 2024.11.11.622123; doi: https://doi.org/10.1101/2024.11.11.622123 |